Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEPIGRSLQGVTGRPDFQKRLEQMKEKVMKDQDVQAFLKENEEVIDQKMIEKSLNKLYEYIEQSKNCSYCSEDENCNNLLEGYHPKLVVNGRSIDIEYYECPVKRKLDQQKKQQSLMKSMYIQQDLLGATFQQVDISDPSRLAMFQHVTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAE-KEYSSMIVYVPEFVRELKNSLQDQTLEEKLNMVKTTPVLMLDDIGAESMTSWVRDEVIGTVLQHRMSQQLPTFFSSNFSPDELKHHFTYSQRGEKEEVKAARLMERILYLAAPIRLDGENRRHP
2QGZ Chain:A ((100-300))-----------------------------------------------------------------------------------------------------------QKQAAISERIQLVSLPKSYRHIHLSDIDVNNASRMEAFSAILDFVEQY-PSAEQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAIS----KEEIDAVKNVPVLILDDIGA------VRDEVLQVILQYRMLEELPTFFTSNYSFADLERKWA---------WQAKRVMERVRYLAREFHLEGANRR--


General information:
TITO was launched using:
RESULT:

Template: 2QGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 873 -58150 -66.61 -319.50
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -66.61
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.543

(partial model without unconserved sides chains):
PDB file : Tito_2QGZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QGZ-query.scw
PDB file : Tito_Scwrl_2QGZ.pdb: