Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHQIVTTQYGKVKGTTENGVHKWKGIPYAKPPVGQWRFKAPEPPEVWEDVLDATAYGSICPQPSDLLSLSYTELPRQSEDCLYVNVFAPDTPSKNLPVMVWIHGGAFYLGAGSEPLYDGSKLAAQGEVIVVTLNYRLGPFGFLHLSSFNE---AYSDNLGLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTK-EQA-ASTSAAFLQVLGINEGQLDKLHTVSAEDLLKAADQLRIAEKENIFQLFFQPALDPKTLPEEPEKAIAEGAASGIPLLIGTTRDEGYLFFTPDSDVHSQETLDAALEY---LLGKPLAEKVADLYPRSLESQIHMMTDLLFWRPAVAYASAQSHY-APVWMYRFDWHPKKPPYNKAFHALELPFVFGNLDGLERMA-KAEITDEVKQLSHTIQSAWITFAKTGNPSTE--AVNWPAYHEETRETLILDSEITIENDPESEKRQKLFPSKGE
2OGT Chain:A ((3-496))--RTVVETRYGRLRGEMNEGVFVWKGIPYAKAPVGERRFLPPEPPDAWDGVREATSFGPVVMQPS------------PSEDGLYLNIWSPAADGKKRPVLFWIHGGAFLFGSGSSPWYDGTAFAKHGDVVVVTINYRMNVFGFLHLGDSFGEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSLLLRSPETAMAMTERILDKAGIRPGDRERLLSIPAEELLRAALS-------LGPGVMYGPVVDGRVLRRHPIEALRYGAASGIPILIGVTKDEYNLFTLTDPSWTKLGE-KELLDRINREVG-PVPEEAIRYY---WQTWLRIMTYRVFVEGMLRTADAQAAQGADVYMYRFDYETPV------CHALELPFVFHNLHQPGVANFVGN-RPEREAIANEMHYAWLSFARTGDPNGAHLPEAWPAYTNERKAAFVFSAASHVEDDPFGRERAAWQ-----


General information:
TITO was launched using:
RESULT:

Template: 2OGT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2725 -58543 -21.48 -129.81
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -21.48
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_2OGT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OGT-query.scw
PDB file : Tito_Scwrl_2OGT.pdb: