Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGDLSISQVSARPGRIGIRARQMFDGYR-----FQRGPVLVVVEDGRISAVDFAGSA-CPDMNLVDLGESTLLPGLVDAHAHLCWDPDGR--------P---EDLAGD--------------PHAVLVGRARRHAAAALRSGITTIRDLGDRDY----AALALREEYRQKTTVGPELVVSGPPL-TRSGGHCWFLGGVADSVEELVDAV-QERA----ARG-ADWIKVMATGGFVTTASDPWQPQYGSGQLAAVVAAAEQVGLPVTAHAHATAG---IAAAVAAGVDGIEHCTFLSEGSAAASPDVVEAIVAQGVWCGMTIPRVYPEMPENLVAVVQDGWRNIRRLIDAGARVALSTDAGVAPGRRHDVLPDDLVYLS-RHGFTSTEVLTGATAAAAASCGLGHRKGRIAPGYDADLLAVAAGVDHDPAGL---CDVKAVWRSGTQVPLQASAVGYNTPS |
| 2Q09 Chain:A ((4-407)) | ------------NCERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLK-YPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEALPIRVKTTLLAAHAVPPEY-------RDDPDSWVETICQEIIPAAAEAGLADAVDVFC-----------EHIGFSLAQTEQVYLAADQYGLAVKGHMDQLSNLGGSTLAANFGALSVDHLEYLDP-------EGIQALAHRGVVATLLPTAFYF--------LKETKLPPVVALRKAGVPMAVSSDINPGT-APIVSLRMAMNMACTLFGLTPVEAMAGVTRHAARALGEQEQLGQLRVGMLADFLVWNCGHPAELSYLIGVDQLVSRVVNGEETLH----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q09.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184502 for 3148 contacts (-58.6/contact) +
2D Compatibility (PS) -39131 + (NN) -22409 + (LL) 2168
1D Compatibility (HY) -9200 + (ID) 3600
Total energy: -256674.0 ( -81.54 by residue)
QMean score : 0.425
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