Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGRCPTVAVVGAGMSGMCVAITLLSAGITDVCIYEKADDVGGTWRDNTYPGLTCDVPSRLYQYSFAK----NPNWTQMFSRGGEIQDYLRGIAERYGLRHRIRFGATVVSARFDD--GRWVLRTDSGTESTVDFLISATGVLHHPRIPPIAGLDDFRGTVFHSARWDHT-VPLLGRRIAVIGTGSTGVQLVCGLAGVAGKVTMFQRTAQWVLPWPNPRYSKLARV----------FHRAFPCLGS--------------LAYKAYS---L-----SFETFAVALS-NPGLHRKLVGAVCRASL-RRVRDPRLRRALTP-DYEPMCKRLVMSGGFYRAIQRDDVELVT---AGIDHVEHRGIVTDDGVLHEVDVIVLATGFDSHA-FFRPMQLTGRDGIRIDDVWQDGPHAHQTVAIPGFPNFFMMLGPHSPVGNFPLTAVAESQAEHIVQWIKRWRHGEFDTMEPKSAATEAYNTVLRAAMPNTVWTTGCDSWYLNKDG-IPEVWPFAPAKHRAMLANLHPEEYDLRRYAAVRATSRPQSA |
| 4AP3 Chain:A ((20-541)) | ---TSYDVVVVGAGIAGLYAIHRFRSQGL-TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAG----DDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAAN-DTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVT-TGAHYDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDARGAAGIEGTPEAVADWVEECRNRAEASLLN-SANSWYLGAN-RVFMPFLGGFGVYREIITEVAESGY----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -356061 for 3915 contacts (-90.9/contact) +
2D Compatibility (PS) -50292 + (NN) -24747 + (LL) 1352
1D Compatibility (HY) -22800 + (ID) 7700
Total energy: -460248.0 ( -117.56 by residue)
QMean score : 0.498
|
|
|