Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDPTDLAFAGAAAQARMLADGALTAPMLLEVYLQRIERLDSHLRAYRVVQFDRARAEAEAAQQRLDAGERLPLLGVPIAIKDDVDIAGEVTTYGSAGHGPA-ATSDAEVVRRLRAAGAVIIGKTNVPELMIMPFTESLAFGATRNPWCLNRTPGGSSGGSAAAVAAGLAPVALGSDGGGSIRIPCTWCGLFGLKPQRDRISLEPHDGAWQGLSVNGPIARSVMDAALLLDATTTVPGP-------EGEFVAAAARQPGRLRIALSTRVPTPLPVRCGKQELAAVHQAGALLRDLGHDVVVRDPDYPASTYANYLPRFFRGISDDADAQA------------H-----------PDRLEARTRAIARLGS-----FFSDRRMAALRAAEVVLSSRIQSIFDDVDVVVTPGAATGPSRIGAYQRRGAVSTLLLVVQRVPYFQVWNLTGQPAAVVPWDFDGDGLPMSVQLVGRPYDEATLLALAAQIESARPWAHRRPSVS |
| 3KFU Chain:E ((2-467)) | ---------LAHEIRARVARGEVSPLEVAQAYLKRVQELDPGLGAFLSLNE-RLLEEAEAVDP------GLPLAGLVVAVKDNIATRGLRTTAGSRLLENFVPPYEATAVARLKALGALVLGKTNLDEFGMGSSTEHSAFFPTKNPFDPDRVPGGSSGGSAAALAADLAPLALGSDTGGSVRQPAAFCGVYGLKPTYGRVSRFGLIAYASSLDQIGPMARSVRDLALLMDAAAGPDPLDATSLDLPPRFQEALEGPLPPLRLGVVREALA---G-NSPGVERALEEALKVFRELGLSVREVSWPSLPQALA----AYYILAPAEASSNLARYDGTLYGRRAAGEEVEGMMEATRALFGLEVKRRVLVGTFVLSSGYYEAYYGRAQAFRRRLKAEAQALFREVDLLLLPTTPHPAFPFGARRDPL---A---MYREDLYTVGANLTGLPALSFPAGFE-GHLPVGLQLLAPWGEDERLLRAALAFEEATARAHLKAPL- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3KFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -174493 for 4194 contacts (-41.6/contact) +
2D Compatibility (PS) -47426 + (NN) -29180 + (LL) 1444
1D Compatibility (HY) -13200 + (ID) 6800
Total energy: -269655.0 ( -64.30 by residue)
QMean score : 0.542
|
|
|