Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMPDYHALIVGAGFSGIGAAIKLDRAGFSDYLVVEAGDGVGGTWHWNTYPGIAVDIPSFSYQFSFEQS----RHWSRTYAPGHELKAYAEHCVDKYGIRSRIRLNTKVLAAEFDDEHSLWRVQTDPGGEITARFLISACGILTVPKLPDIDGVDSFEGVTMHTARWDHT-QDLTGKRVGIIGTGASAVQVIPEMAPIVSHLTVFQRTPIWCFPKFDVPLPTAVRW----------AMRI-PGGKA--------------VHRLLSQA--F------VEATFPIAAHYFAVFPLAKHMESAGRRYLRQQVHDPVVREQLTP-RYAVGCKRPGFHNTYLSTFNRDNVRLVT---EPIDKITPTAVATTDGASHEIDVLVLATGFKVLDTDSIPTYAVTGTGGASLSRFWDEHRLQAYEGVSVPGYPNFFTVFGPYGY-VGSSYFALIETQAHHIIRCLKRARRTGATRIEVTEEANARYFAEVMRRRHRQVFWQDSCRLANSYYFDKNGDVP-LRPTTTVEAYWRSRRFDLGDYRISS |
| 4AP3 Chain:A ((20-541)) | --TSYDVVVVGAGIAGLYAIHRFRSQGL-TVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAG----DDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDP---AANDTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVT-TGAHYDLDMIVLATGFDAMTG-SLDKLEIVGRGGRTLKETWAAG-PRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLDARGAAGIEGTPEAVADWVEECRNRAEASLL-----NSANSWYLGAN-RVFMPFLGGFGVYREIITEVAESGY---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298128 for 3914 contacts (-76.2/contact) +
2D Compatibility (PS) -51302 + (NN) -27811 + (LL) 1388
1D Compatibility (HY) -23600 + (ID) 8300
Total energy: -407753.0 ( -104.18 by residue)
QMean score : 0.534
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