Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLDLFDLHGKRALITGASTGIGKRVALAYVEAGAQVAIA--ARHLDALEKLADEIGTSGGK---VVPVCCDV--SQHQQVTSMLDQVTAELGGIDIAVCNAGI-----ITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVK-QGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHK--IRVNSVSPGYILTELVEP---YTEYQPLWEPKIPLGRL---GRPEELAGLYLYLAS-EASSYMTGSDIVIDGGYTCP-- |
| 1FMC Chain:A ((1-255)) | MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDI--NADAANHVVDEIQQL---GGQAFACRCDITS--EQELSALADFAISKLGKVDILVNNAGGGGPKPF-D-MP----MADFRRAYELNVFSFFHLSQLVAPEMEKN-G-GGVILTITSMAAEN-KNINMT-SYASSKAAASHLVRNMAF-DLGE-KNIRVNGIAPGAILTDALKSVITPEIEQKMLQ-HTPI--RRLG-QPQDIANAALFLCSP-AASWVSGQILTVSGGGVQELN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1FMC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185281 for 1889 contacts (-98.1/contact) +
2D Compatibility (PS) -25120 + (NN) -7326 + (LL) 632
1D Compatibility (HY) -8000 + (ID) 4100
Total energy: -229195.0 ( -121.33 by residue)
QMean score : 0.626
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