Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMPHSAALNAARRSADLTALADGGALDVIVIGGGITGVGIALDAATRGLTVALVEKHDLAFGTSRWSSKLVHGGLRYLA-SGNVGIARRSAVERGILMTRNAPHLVHAMPQLVPLLPSMGHTKRALVRAGFLAGDALRVLAGTPAATLPRSRRIPASRVVEIAPTVRRDGLDGGLLAYDGQLIDDARLVMAVARTAAQHGARILTYVGASNVTGT--SVELTDRRTRQSFALSARAVINAAGVWAGEIDPS----LRLRPSRGTHLVFDAKSFANPTAALTIPIPGELNRFVFAMPEQLGRIYLGLTDEDAPGPIPDVPQPSSEEITFLLDTVNTALGTAVGTKDVIGAYAGLRPLIDTGGAGVQGRTADVSRDHAVFESPSGVISVVG--G-KLTEYRYMAEDVLNRAITLRHLRAAKCRTRNLPLIGAPANPGPAPGSGAGLPESLVARYGAEAANVAAAATCERPTEPVADGIDVTRAEFEYAVTHEGALDVDDILDRRTRIGLVPRDRERVVAVAKEFLSR |
| 1RYI Chain:A ((15-362)) | -----------------------KRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLG----EELYALSGVDIRQHNGG----MFKLAFSEEDVLQLRQMD-----DLDSVSWYSKEEVLEKEPYASGD-IFGASFIQDDVHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIK---TP-SGDVWANHVVVASGVWSGMFFKQLGLNNAFLPVKGECLSVWNDDIPL--TKTLY------HDHCYIVPRKSGRLVVGATMKPGD----WSETPDLGGLESVMKKAKTML-PAIQNMKVDRFWAGLRPGTKDGK------P-YIGRHP----EDSRILFAAGHFRNGILLAPATGALISDLIMNK----------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1RYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -225991 for 2950 contacts (-76.6/contact) +
2D Compatibility (PS) -35237 + (NN) -2113 + (LL) 9712
1D Compatibility (HY) -8000 + (ID) 3200
Total energy: -264829.0 ( -89.77 by residue)
QMean score : 0.364
|
|
|