Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
3BZQ Chain:A ((1-112))
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGR---------------DFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
General information:
TITO was launched using:
RESULT:
Template:
3BZQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69500 for 661 contacts (-105.1/contact) +
2D Compatibility (PS) -10855 + (NN) -2466 + (LL) 928
1D Compatibility (HY) -14800 + (ID) 4850
Total energy: -101543.0 ( -153.62 by residue)
QMean score : 0.661
(partial model without unconserved sides chains):
PDB file :
Tito_3BZQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BZQ-query.scw
PDB file :
Tito_Scwrl_3BZQ.pdb
: