Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVEPDVETLDPPLPPVPDGAVMVTVKIARFNPDDPDAFAATGGWQSFRVPCLP--SDRLLNLLIYIKGYLDGTLTFRRSCAHGVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDAYRAIKPYLITSGNPP-TRERIQSPTDRARYDDTTKCILCACCTTSCPVFWHE-GSYFGPAAIVNAHRFIFDSRDEAAAERLDILNEVDGVWRCRTTFNCTESCPRGIEVTKAIQEVKRALMFTR |
| 2WDQ Chain:B ((1-236)) | ---------------------MRLEFSIYRYNPDVDDA----PRMQDYTLEADEGRDMMLLDALIQLKE-KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQ----PGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158291 for 1802 contacts (-87.8/contact) +
2D Compatibility (PS) -24531 + (NN) -9864 + (LL) 956
1D Compatibility (HY) -22000 + (ID) 4950
Total energy: -218680.0 ( -121.35 by residue)
QMean score : 0.450
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