Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNSAHVFVEADIVTADLHAILEQHRPEVVFHLAAQIDVRRSVADPQFDAAVNVIGTVRLAEAARQTGVRKIVHTSSGGSIYGTPPEYPTPETAPTDPASPYAAGKVAGEIYLNTFRHLYGLDCSHIAPANVYGPRQDPHGEAGVVAIFAQALLSG-KPTRVFGDGTNTRDYVFVDDVVDAFVRVSADV----GGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAERVLGWRPQIELADGVRRTVEYFRHKHTD |
| 3KO8 Chain:A ((1-310)) | MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRR----EFV-NPSAELHVRDLKDYSWG---AGIKGDVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSS-TVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRH----GVIYDFIMKLRRNPNVLEVL----QRKSYLYVRDAVEATLAAWKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRPEIRLV----GDVKYMTLAVTKLMKLTGWRPTMTSAEAVKKTAEDLAKEL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KO8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148390 for 2649 contacts (-56.0/contact) +
2D Compatibility (PS) -31152 + (NN) -14206 + (LL) 252
1D Compatibility (HY) -22000 + (ID) 5050
Total energy: -220546.0 ( -83.26 by residue)
QMean score : 0.536
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