Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEHLDVVIVGAGISGVSAAWHLQDRCPTKSYAILEKRESMGGTWDLFRYPGIRSDSDMYTLGFRFRPWT-----GRQAIADGKPILEYVKSTAAMYGIDRHIRFHHKVISADWSTAENRWTVHIQSHGTLSALTCEFLFLCSGYYNYDEGYSPRFAGSEDFVGPIIHPQHWPED-LDYDAKNIVVIGSGATAVTLVPALADSGAKHVTMLQRSPTYIVSQPDRDGIAEKLN----------RW--L----------PETMA---------YTAVRWKNVLRQAAVYSACQKWP---------RRMRKMFLSLIQRQLPEGYDVRKHFGP-HYNPWDQRLCLVPNGDLFRAIRHGKVEVVT---DTIERFTATGIRLNSGRELPADIIITATGLNLQLFG--GATAT-IDGQQVDI--T-TTMAYKGMMLSGIPNMAYTV-GYTNA----SWTLKADLVSEFVCRLLNYMDDNGFDTVVVERPGSD---------VEERPFMEFTPGYVLRSLDELPKQGSRTPWRLNQNYLRDI-RLIRRGKIDDEGLRFAKRPAPVGV |
| 4AP3 Chain:A ((20-541)) | --TSYDVVVVGAGIAGLYAIHRFRSQG--LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG---DEVSARFLVVAAGPL--SNANTPAFDGLDRFTGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQ-AEQLFVFQRSANYSIPAG----DDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLG--GV---LFSKAFPDQLTDPAANDTARAFWEEKIRAVV-DDPAVAELLTPKDHAIGAKRIV--LDSGYYETYNRDNVELVDLRSTPIVGMDETGIVT-TGAHYDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETWAAGPRTYLGLGIDGFPNFF-NLTGPGSPSVLANMVLHSELHVDWVADAIAYLDARGAAGIEGTPEAVADWVEECRNRAEASLLNSAN-SWYLGAN------RVFMPFLGGFGVYREIITEVAESGY---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4AP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271315 for 3535 contacts (-76.8/contact) +
2D Compatibility (PS) -46820 + (NN) -14763 + (LL) 1468
1D Compatibility (HY) -22000 + (ID) 5300
Total energy: -358730.0 ( -101.48 by residue)
QMean score : 0.449
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