Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQ-LFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
3QY1 Chain:A ((6-220))
--------------------DIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLVIHTD---LNCLSVVQYAVDVLEVEHIIICGHSGCGGIKAAVENPE---LGLINNWLLHIRDIWLKHSSLLGKMPEEQRLDALYELNVMEQVYNLGHSTIMQSAWKRGQNVTIHGWAYSINDGLLRDLDVTATNRETLENGYHKGISALSLKYI--
General information:
TITO was launched using:
RESULT:
Template:
3QY1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114686 for 1619 contacts (-70.8/contact) +
2D Compatibility (PS) -22467 + (NN) -4615 + (LL) 1076
1D Compatibility (HY) -16800 + (ID) 3150
Total energy: -160642.0 ( -99.22 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_3QY1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QY1-query.scw
PDB file :
Tito_Scwrl_3QY1.pdb
: