Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRSSRKDEILQAALACFSEHGVDATTIEMIRDRSGASIGSLYHHFGNKERIHGELYLAGIGQYAALLEAGFA--RARSAEETVRLLVTSYIDWVVANPDWARFILHSRGRVEAGELGERLRADNQAHFARIHAALAGYRAEGLFRE-MPDDCFASVVIGPAHDLARQWLAGRTRVA-LADCRELLAQVAWDSVRAA
1T56 Chain:A ((22-214))
--GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQAARAT--SVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIWVTSIYGE
General information:
TITO was launched using:
RESULT:
Template:
1T56.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94008 for 1353 contacts (-69.5/contact) +
2D Compatibility (PS) -20473 + (NN) -9834 + (LL) 332
1D Compatibility (HY) -3200 + (ID) 1550
Total energy: -128733.0 ( -95.15 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_1T56.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T56-query.scw
PDB file :
Tito_Scwrl_1T56.pdb
: