Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILG-DASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTPA--------ELRDAALKHEVAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYTENGPVGLAGDKKVVIVSTAGGVHAGQ--PTGAAHEGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
3W7A Chain:A ((2-209))
TKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAID-AD--VFAAWGKFAAGEGFEALTEVQQQKVAAMNTNLETFMNADRYVFVTPMWNFSYPPVVKAYLDNVAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFVGVNDTEYIAVEGMNANPEKAQEIKEAAIANARELAKRF
General information:
TITO was launched using:
RESULT:
Template:
3W7A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102442 for 1495 contacts (-68.5/contact) +
2D Compatibility (PS) -21928 + (NN) -10349 + (LL) 464
1D Compatibility (HY) -9600 + (ID) 2950
Total energy: -146805.0 ( -98.20 by residue)
QMean score : 0.498
(partial model without unconserved sides chains):
PDB file :
Tito_3W7A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3W7A-query.scw
PDB file :
Tito_Scwrl_3W7A.pdb
: