Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRIFADNAQSIGNTPLVQINRIA-PRGVTILAKIEGRNPGYSVKCRIGANMIWDAEASGRLKSGMTLVEPTSGNTGIGLAFVAAARGYKLILTMPASMSLERRKVLKALGAELVLTEPAKGMKGAIQKAEELVAGDPGKYFMPQQFDNPANPAIHEKTTGPEIWNDTEG-AVDVLVSGVGTGGTLTGVSRYIKNTRGKPILAVAVEPVTSPVISQTLAGEEVKPAPHKIQGIGAGFVPKNLDLSLVDRVEKIGDDEAKNMALRLMQEEGILCGISSGAAMAAAVRLAEEPNMQGKTIVVILPDSGERYLSSMLFDGLFSEQELTQ |
| 3X44 Chain:A ((2-311)) | --PLFNSILDTIGRTPIVRLQRMAPE-HTSVYVKVESFNPGGSVADRLALSVVLDAEAKGLLKPGDTIVECTSGNVGIALAMVAAARGYRFVAVMGDTYSVERRKLIRAYGGKLVLFPGHLGSKGGNLIADELAEK-YGWF-RARQFDNPANPSYHRETTASEILADFAGKRLDHFVTGFGTTGTLTGVGQMLRVAR-PEVRVVALEPSNAAMLARG------EWSPHQIQGLAPNFVPGVLDRSVIDDLVTMDEVTARDTSRRLAAEEGIFAGISAGATVATALSIAEHA-PEGTVLLAMLPDTGERYLSTFLFDGVDEGSD--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3X44.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -104266 for 2845 contacts (-36.6/contact) +
2D Compatibility (PS) -34740 + (NN) -20836 + (LL) 980
1D Compatibility (HY) -23600 + (ID) 6650
Total energy: -189112.0 ( -66.47 by residue)
QMean score : 0.529
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