Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNE--TAATFSGQSTNNAVIGTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILT------NELNFALVGSEDGTDNDYNDAVVVINWPLG
2WRA Chain:A ((7-128))
SNRAGEFSIPPNTDFRAIFFANAAEQQHIKLFIGDSQEPAAYHKL-TT-RDGPREATLNSGN-GKIRFEVSVNGKPSATDARLAPINGKKGSPFTVNFGIVVSEDGHDSDYNDGIVVLQWPIG
General information:
TITO was launched using:
RESULT:
Template:
2WRA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50736 for 843 contacts (-60.2/contact) +
2D Compatibility (PS) -13125 + (NN) -12960 + (LL) 12
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -84559.0 ( -100.31 by residue)
QMean score : 0.717
(partial model without unconserved sides chains):
PDB file :
Tito_2WRA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WRA-query.scw
PDB file :
Tito_Scwrl_2WRA.pdb
: