Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVFLAIGALLPICLAGGALLGYAAVRFRVQGDPVAEQVNALLPQTQCGQCGYPGCKPYAEAIAAGDKINKCPPGGEATIRALADLLDLEPEPLDAAEETPPRVAYIREAECIGCTKCIQACPVDAIVGAAR--------------------------LMHTVIADECTGCDLCLEPCPV--DCIEMREIPDDVRHWKWPQPSPRLIASDRERAA |
2C42 Chain:A ((678-768)) | ------------------------------------------------------------------------------------------------------INVPQWVPENCIQCNQCAFVCPHSAILPVLAKEEELVGAPANFTALEAKGKELKGYKFRIQINTLDCMGCGNCADICPPKEKALVMQPLDT----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58831 for 416 contacts (-141.4/contact) +
2D Compatibility (PS) -6725 + (NN) -4433 + (LL) 7056
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -67333.0 ( -161.86 by residue)
QMean score : 0.539
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