Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLMAR
1YQN Chain:A ((3-158))
MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHALTDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQAPKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGMGLGIACEAVALLIK-
General information:
TITO was launched using:
RESULT:
Template:
1YQN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116741 for 1316 contacts (-88.7/contact) +
2D Compatibility (PS) -17229 + (NN) -11222 + (LL) 100
1D Compatibility (HY) -17200 + (ID) 5450
Total energy: -167742.0 ( -127.46 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_1YQN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1YQN-query.scw
PDB file :
Tito_Scwrl_1YQN.pdb
: