Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVILLGAPGAGKGTQARFITEKFGIPQISTGDMLRAAVKAGSPLGQQVKGVMDSGGLVSDDIIIALIKERITEADCAKGFLFDGFPRTIPQAEALKDA----GVTIDHVVEIAVDDEEIVSRIAGRRVHPASGRVYHTEHNPPKVAGKDDVTGEELIQREDDKEETVRHRLSVYHSQTKPLVDFYQKLSAAEGTPKYHSIAGVGSVEQITAKVLSALS
3BE4 Chain:A ((6-217))
HNLILIGAPGSGKGTQCEFIKKEYGLAHLSTGDMLREAIKNG--IGLEAKSIIESGNFVGDEIVLGLVKEKFDLGVCVNGFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEIIERISGRCTHPASGRIYHVKYNPPKQPGIDDVTGEPLVWRDDDNAEAVKVRLDVFHKQTAPLVKFYEDLGI------LKRVNAKLPPKEVTEQIKKIL-
General information:
TITO was launched using:
RESULT:
Template:
3BE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90200 for 1587 contacts (-56.8/contact) +
2D Compatibility (PS) -22702 + (NN) -12140 + (LL) -144
1D Compatibility (HY) -19600 + (ID) 4900
Total energy: -149686.0 ( -94.32 by residue)
QMean score : 0.586
(partial model without unconserved sides chains):
PDB file :
Tito_3BE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BE4-query.scw
PDB file :
Tito_Scwrl_3BE4.pdb
: