Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLPLDDERVELLEGDAADAATLAAALK--GCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSS-----PYSGVISIFTERALK-GTPITVFG------DGEQTRDFIYVADLVDFLVQALEAT--AVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADARAGDIRHSRANNERLLRRFRFDQPTP-MGVGLARLLGR |
2C20 Chain:A ((2-319)) | ---NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAI---TEGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVD-LITEETMTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVASSQKAKEKLGWDPRYVNVKTIIEHAWN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -168720 for 2570 contacts (-65.6/contact) +
2D Compatibility (PS) -32890 + (NN) -13002 + (LL) 556
1D Compatibility (HY) -21600 + (ID) 4900
Total energy: -240556.0 ( -93.60 by residue)
QMean score : 0.511
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