Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKYT-GTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIEYRGFKQEIVEELAKFAGVPVFNGLTDE-YHPTQMLADVLTMREH-SDKPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLADI |
| 1ORT Chain:A ((1-335)) | -AFNMHNRNLLSLMHHSTRELRYLLDLSRDLKRAKY-TGTEQQHLKRKNIALIFEKTSTRTRCAFEVAAYDQGANVTYIDPNSSQIGHKESMKDTARVLGRMYDAIGYRGFKQEIVEELAKFAGVPVFNGLTD-EYHPTQMLADVLTMREHSD-KPLHDISYAYLGDARNNMGNSLLLIGAKLGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTEDPKEAVKGVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHCLPAFHNSETKVGKQIAEQYPNLANGIEVTEDVFESPYNIAFEQAENRMHTIKAILVSTLADI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ORT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183766 for 2806 contacts (-65.5/contact) +
2D Compatibility (PS) -35899 + (NN) -17393 + (LL) 288
1D Compatibility (HY) -44400 + (ID) 16500
Total energy: -297670.0 ( -106.08 by residue)
QMean score : 0.765
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