Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNRGVVYLGPG---KVEVQNIPYPKMQDPQGRQIDHGVILRVVSTNICGSDQHMVRGRTT--APEGLVLGHEITGEVVEIGRGVETMKIGDLVSVPFNVACGHCRTCKEQHTGVCLTVNPARAGGAYGYVDMGGWVGGQAEYVLVPYADFNLLKLPNREAAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYIAGA-GPVGLAAAASARLLGAAVVIVGDVNPTRLAHAKKQGFEIADLSKDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHSGSQQEAPATVLNSLMGITRVAGKIGIPGLYVTEDPGAVDAAAKHGALSIRFGLGWAKSHSFHTGQTPVMKYNRQLMQAIMWDRIKIADIVGVEVITLDDAPKGYGEFDAGV-PKKFVIDPHNLFRAA |
| 2EIH Chain:A ((1-342)) | ---MRAVVMRARGGPEVLEVADLPVPEPG-P------KEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQI------LGE----HRHGTYAEYVVLPEA--NLAPKPKNLS----FEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTGAL----------------YFEGVIKATANGGRIAIAGASSGYEG------------TLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLK---PVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193411 for 3069 contacts (-63.0/contact) +
2D Compatibility (PS) -36000 + (NN) -10921 + (LL) 3300
1D Compatibility (HY) -10800 + (ID) 4200
Total energy: -252032.0 ( -82.12 by residue)
QMean score : 0.609
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