Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDYLNNIIMMNQNKSNYSIDALYQFLFEFIFDIEERYIRMYVQLSNTPEEFSGNIYGQIQDLNQSLSKEIAKFYDESKIKMTKEDFQNLILLFLESWYLKASFSQKFGAVEESKSQFKDEVYSLLNIFLKK
2ZCN Chain:D ((1-184))
MKDKIIDNAITLFSEKGYDGTTLDDISKSVNIKKASLYYHYDNKEEIYRKSVENCFNYFIDFLL-RNHDDNYSIDGLYQFLFKFIFDVDERYIKLYVQLSSAPEALNSEIKHHLQEINTTLHDELIKYYDPTHIALDKEDFINLILLFLETWYFRASFSQKFGIIEDSKNRFKDQVYSLLNVFLK-
General information:
TITO was launched using:
RESULT:
Template:
2ZCN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -107786 for 1277 contacts (-84.4/contact) +
2D Compatibility (PS) -19214 + (NN) -3220 + (LL) 272
1D Compatibility (HY) -28400 + (ID) 6000
Total energy: -164348.0 ( -128.70 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_2ZCN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZCN-query.scw
PDB file :
Tito_Scwrl_2ZCN.pdb
: