Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNPTFGEKIDNVDYRSRFGVYAIIPNPTHDKIILVQAPNGAWFLPGGEIEENENHLEALTRELIEELGYSATIGHYYGQADEYFYSRHRDTYYYNPAYIYEVTAYHKEQAPLEDFNHLAWFPIQEAKEKLKRGSHRWGVQAWEKNHHSRK
3O8S Chain:A ((68-197))
---------------TPKLDTRAAIFQE--DKILLVQENDGLWSLPGGWCDVDQSVKDNVVKEVKEEAGLDVEAQRVVAILDKHKNNP------RVTKVFILCRLLGGEFQPNSETVASGFFSLDDLPPLYLGKNTAEQLALCLEASRSEH
General information:
TITO was launched using:
RESULT:
Template:
3O8S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43390 for 959 contacts (-45.2/contact) +
2D Compatibility (PS) -13699 + (NN) -4099 + (LL) 876
1D Compatibility (HY) -3600 + (ID) 1100
Total energy: -65012.0 ( -67.79 by residue)
QMean score : 0.374
(partial model without unconserved sides chains):
PDB file :
Tito_3O8S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O8S-query.scw
PDB file :
Tito_Scwrl_3O8S.pdb
: