Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVLRSLASPAALTDPKRCASVVGVAAFAVRREHAPDALGGPPGL-PAPRGFRAAFAAAYAVAYL--AGGERRMLRLIRRYGPIMTMPILSLGDVAIVSDSALAKEVFTAPTDVLLGGEGVGPAAAI-YGSGSM-FVQEEPEHLRRRKLLTPPLHG--AALDRYVPIIENSTRAAMHTWPV--DRPFAMLTVARSLMLDVIVKVIFGVDDPEE---VRRLGRPFERLLNLGV--SEQLTVRYALRRLGALRVWPARARANTEIDDVVMALIAQRRADPRLGERHDVLSLLVSARGE------SGEQLSDSEIRDDLITLVLAGHETTATTLAWAFDLLLHHPDALRRVRAEAVGG-------------GEAFTTAVINETLRVRPPAPLTA-RVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRP-----QTYAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEFTAVDDEPERIVRRSIMLVPRRGTRVRFRPAR |
| 3SWZ Chain:A ((12-452)) | ------------------------------------------SLLSLPLVGSLPF-------LPRHGHMHNNFFKLQKKYGPIYSVRM-GTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISFPVFVAVTNVISLICFNTSYKNGDPELNVIQNYNEGIIDNLSKDSLVDLVPWLK-IF-PNKTLEKLKSHVKIRNDLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGDQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDD-------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207948 for 3082 contacts (-67.5/contact) +
2D Compatibility (PS) -42274 + (NN) -16047 + (LL) 5860
1D Compatibility (HY) -21200 + (ID) 4150
Total energy: -285759.0 ( -92.72 by residue)
QMean score : 0.394
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