Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASA----LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVP-----PLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPVPHLRL
2PMI Chain:A ((19-302))---------------ATVYKGLNKTTGVYVALKEVKLDS-EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH-------


General information:
TITO was launched using:
RESULT:

Template: 2PMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -183149 for 2125 contacts (-86.2/contact) +
2D Compatibility (PS) -29758 + (NN) -15956 + (LL) 1528
1D Compatibility (HY) -33600 + (ID) 7850
Total energy: -268785.0 ( -126.49 by residue)
QMean score : 0.647

(partial model without unconserved sides chains):
PDB file : Tito_2PMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PMI-query.scw
PDB file : Tito_Scwrl_2PMI.pdb: