Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYDFKVKLSSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREFLTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPPLKKVRVVPPTTTSGGLIMTSDYQRSNPHAAYPNPGPSTSQPQSSMGYSATSQQPPQYSHQTHRY |
3ZDU Chain:A ((2-292)) | ----------------MEMYETLG-KVGEGSYGTVMKCKHKN--TGQIVAIKIFY----NKIAMREIKFLKQFHHENLVNLIEVFRQ--KKKIHLVFEFIDHTVLDELQHYC----H----GLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPENILVSQS----GITKLCDFGFART-----DIY---DDEVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSS---------DLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLP--QV-QHPKNARKKY----PKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTRDGF---------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZDU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160190 for 2225 contacts (-72.0/contact) +
2D Compatibility (PS) -29611 + (NN) -11764 + (LL) 4764
1D Compatibility (HY) -21200 + (ID) 4650
Total energy: -222651.0 ( -100.07 by residue)
QMean score : 0.460
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