Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANYPQLNKEVQQGEIKVVMHTNKGDMTFKLFPNIAPKTVENFVTHAKNGYYDGITFHRVINDFMIQGGDPTATGM-GGESIY----GGAFEDEFSLNA-FNLYGALSMANSGPNTNGSQFFIVQMKEVPQNMLSQLADGGWPQPIVDAYGEKGGTPWLDQKHTVFGQIIDGETTLEDIANTKVGPQDKPLHDVVIESIDVEE
3BO7 Chain:A ((5-173))
-------------KKGYLRIVTTQGSLNIELHADMAPRACDSFLRLCAVKYFDDTIFHRCIRNFMIQGGRAELRQPQSPRSISGFPGGAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCE----------------------------HLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVFK
General information:
TITO was launched using:
RESULT:
Template:
3BO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59172 for 1234 contacts (-48.0/contact) +
2D Compatibility (PS) -16868 + (NN) -5781 + (LL) 1432
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -91439.0 ( -74.10 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_3BO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BO7-query.scw
PDB file :
Tito_Scwrl_3BO7.pdb
: