Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKREDVRNIAIIAHVDHGKTTLVDELLKQSGIFRENEHVDERAMDSNDIERERGITILAKNTAVDY-----------------------KGTRINILDTPGHADFGGEVERIMKMVDGVVLVVDAYEG-TMPQTRFVLKKALEQN-LKPVVVVNKIDKPSARP-EGVVDEVLDLFIELEANDEQLEFPVVYASAVNGTASLDPEKQDDNLQSLYETIIDYVPAPIDNSDEPLQFQVALLDYND----YVGRIGIGRVFRGKMRVGDNVSLIKLDGT---------VKNFRVTKIFGYFGLKRLEIEEAQAGDLIAV-SG----M--EDINVGETVTPHDHQEALPVLRIDEPTLEMTFKVNNSPFAGREGDFVTARQIQERLNQQLETDVSLKVSNTDSPDTWVVAGRGELHLSILIENMRREGYELQVSKPQVIIKEIDGVMCEPFERVQCEVPQENAGAVIESLGARKGEMVDMTTTDNGLTRLIFNVPARGMIGYTTEFMSMTRGYGIINHTFEEFRPRIKAQIGGRRNGALISMDQGSASTYAILGLEDRGVNFMEPGTEVYEGMIVGEHNRENDLTVNITKTKHQTNVRSATKDQTQTMNRPRILTLEEALQFINDDELVEVTPESIRLRKKILNKNVREKEAKRIKQMMQENE |
| 1KK1 Chain:A ((6-317)) | ---SRQAEVNIGMVGHVDHGKTTLTKALTGV-------------WTD--SEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEKALENYRQIKEFIEGTV----AENAPIIPISALHG----------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAG----GQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109327 for 2078 contacts (-52.6/contact) +
2D Compatibility (PS) -27429 + (NN) -1612 + (LL) 23628
1D Compatibility (HY) -6800 + (ID) 3400
Total energy: -124940.0 ( -60.13 by residue)
QMean score : 0.605
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