Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKVYVAGAIPEVGLKLLQ--EHFEVEMYEGKGLVDKDTLIKGVKNATALISLLSTNVDKDVIDAG-KDLKIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVARRARAFDMDVLYTGPNRKEEKER-EIGAKYVDLDTLLKNADFITINAAYNPKMHHLIDTEQFKMMKSTVYLINASRGPIVHEQALVQALKDNEIEGAALDVYEFEPDI-TDDLKSLNNVVLTPHIGNATFEARDMMSKIVANAAISAVQGEKPQFVVN |
2GCG Chain:A ((8-329)) | LMKVFVTRRIPAEGRVALARAADCEVEQWDSDEPIPAKELERGVAGAHGLLCLLSDHVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAEFQAEFVSTPELAAQSDFIVVACSLTPATEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRTRNTMSLLAANNLLAGLRGEPMPSELK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GCG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186424 for 2661 contacts (-70.1/contact) +
2D Compatibility (PS) -34471 + (NN) -16782 + (LL) 0
1D Compatibility (HY) -24000 + (ID) 5350
Total energy: -267027.0 ( -100.35 by residue)
QMean score : 0.548
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