Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESVKTVKTNKVGKNTETANTEASKETHFKQASAITNTL--RSIGGIF-----TKIAKKVRELVKKHPKKSSVALVV------LTHIACKRAKELDDK----------VQDKSKQAEKENQINWWKYSGLTIAASLLLAACSTGDIDKQIELEQEKKEANKSGIKLEQERQK---TEQERQKTNKSEIELEQERQKTNKSGIELANSQIKAEQERQKTEQEKQKANKSEIELEQQKQKTINTQRDLIKEQKDFIKETEQN--CQEKHGQLFIKKARIKTGITTGIAIEIEAECKTPKPAKTNQTPIQPKHLPNSKQPRSQRGSKAQELIAYLQKELESLPYSQKAIAKQVDFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSK--AQAKMLEMRNPQAHLPTSQSLLFVQKIFADINKEIEAVANTEKKTEKAGYGYSKRM |
| 4WW4 Chain:A ((3-458)) | -------QISEVRGNTRDHRTAAH--THIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRVRETKDVYEGEVSTLLIGLKSARGQKLDQKERVQVGDVIYIETNTGACRSDAYATEFDLEAEEYVPIPKGEVHKKKEIVQDVTLHDLDVANARPDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLFIDEAHM---LDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLI-IPTHPYEPDEIRRIVRIRAQTEGVQLT-DAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVD-VQDIAEAEELFLDARRSANILTSTGGLH----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 140036 for 2674 contacts (52.4/contact) +
2D Compatibility (PS) -40761 + (NN) -12135 + (LL) 1724
1D Compatibility (HY) -8400 + (ID) 3000
Total energy: 77464.0 ( 28.97 by residue)
QMean score : 0.240
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