Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVRDIDKTTSLHLNNEAQFLCFRLDAEKDAQLYGMNIFKIREIIHYDGEVTEILGGSDGVMLGFLSVRGESIPLVDVKRWLHYNANDPSRDLKECSVKDDHNLVIVCHFSNHSIALKVLKIERIIHKNWTEISAGDKQGINEEGKLSAITRFDEQRVVQILDVEKMISDVFPSLKDLDDLTLRCIEAIQSQKLILIAEDSLSALKTLEKIVQTLELRYLAFPNGRELLDYLYEKEHYQQVGVVITDLEMPVISGFEVLKTIKADSRTEHLPVIINSSMSSDSNRQLAQSLEADGFVVKS-NILEIHEMLKKTLS |
3CG4 Chain:A ((7-124)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KGDVMIVDDDAHVRIAVKTILSDAGFHIISADSGGQCIDLLKK----GFSGVVLLDIMMPGMDGWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56041 for 886 contacts (-63.3/contact) +
2D Compatibility (PS) -12795 + (NN) -6553 + (LL) 14144
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -67695.0 ( -76.41 by residue)
QMean score : 0.568
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