Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDP-ANWEILAYLLEHDSTHGLLNKEVRYSNGKLIIGSLEIPVFNS--IKD----LKGVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAHP--LDKRRSRAAASNIIPTTTKAALALHKVLPNLKNKMHGHSVRVPSLDVSMIDLSLFLEKKALKDPINDLLITASKGTLKGVLEIDLKERVSSDFISNPNSVIIAPDLTFTLE-NMVKIMGWYDNEWGYSNRLVDMAQFMYHY |
| 2B4R Chain:O ((12-344)) | TKLGINGFGRIGRLVFRAAFG----RKDIEVVAINDPFMDLNHLCYLLKYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPSQIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPKD-----DTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAAEGPLKGILGYTEDEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B4R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -247059 for 2818 contacts (-87.7/contact) +
2D Compatibility (PS) -34024 + (NN) -3792 + (LL) 376
1D Compatibility (HY) -24000 + (ID) 6900
Total energy: -315399.0 ( -111.92 by residue)
QMean score : 0.506
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