Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQALSDGFKNALNKIRFQ------------D-DEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKA-----GGIGKQQFLDALEKSLLEILSAKGSSG---FT--FAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKTKNK-KVLLCACDLQRLAAVEQLKVLGEQVGVEVFHEENK-SVKEIANNALKRAKEAQFDVLIVDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLSKFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFMPERIVGRLMGAGDIISLAEKTASVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMASALKDTDLESSLEVKKIKAMVNSMTKKERENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMAKRLTNKKGISDLMNLMSQAKNQTPPKMR |
| 3E70 Chain:C ((7-324)) | MFGKLREKLKSFVKRVEEEVEKEEEEVILTVEIKEKDVDKALDELEIDLLEADVALEVVDALREKIKQKLVGKKVRIG---GKIIEEAVKEAVSEILET--SRRIDLIEEIRKAEKPYVIMFVGFNGSGKTTTIAKLANWLKN-HGFSVVIAASDTFRAGAIEQLEEHAKRIGVKVIKHSYGADPAAVAYDAIQHAKARGIDVVLIDTAGRSETNRNLMDEMKKIARVTKPNLVIFVGDALAGNAIVEQARQFNEAVKIDGIILTKLDADARGGAALSISYVIDAPILFVGVGQGYDDLRPFEKEWFLERIFG---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3E70.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -149222 for 2371 contacts (-62.9/contact) +
2D Compatibility (PS) -30695 + (NN) -18342 + (LL) 10208
1D Compatibility (HY) -23200 + (ID) 5000
Total energy: -216251.0 ( -91.21 by residue)
QMean score : 0.613
|
|
|