Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFNRTNPHVNIGTIGHVYHGKTTLSAAISAVLSLKGLAEMKDYDNIDNAPQEKERGITIATSHIEYET-----------------------ETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG-PMPQTREHILLSRQVGVPHIVVFLNKQDMVDDQELLELVEMEVRELLSAYEFPGDDTPIVAGSALRALEEAKAGNVGEWGEKVLKLMAEVDSYIPTPERDTEKTFLMPVEDVFSIAG----RGTVVTGRIERGVVKVGDEVEIVGIRA----------TQKTTVTGVEMFRKELEKGEAGDNVGVLLRG---TKKEEVERGMVLCKPGS-ITPHKKFEEEIYVLSKEEGGRH----TPFFTNYRPQFYVRTTDVTGSITLPEGVEMVMPGDNVKITVELISPVALELGTKFAIREG----GRTVGAGVVSNIIE |
| 1KK1 Chain:A ((6-410)) | -------SRQAEVNIGMVGHVDHGKTTLTKALTGV-------------WTD--SEELRRGITIKIGFADAEIRRCPNCGRYSTSPVCPYCGHETEFVRRVSFIDAPGHEALMTTMLAGASLMDGAILVIAANEPCPRPQTREHLMALQIIGQKNIIIAQNKIELVDKEK-ALENYRQIKEFIEGTV--AENAPIIPISALHG-------------ANIDVLVKAIEDFIPTPKRDPNKPPKMLVLRSFDVNKPGKLVGGVLDGSIVQGKLKVGDEIEIRPGVPYEEHGRIKYEPITTEIVSLQAGGQFVEEAYPGGLVGVGTKLDPYLTKGDLMAGNVVGKPGKLPPVWDSLRLEVHLLERVV--EQELKVEPIKRKEVLLLNVGTARTMGLVTGL---------GKDEIEVKLQIPVCAEPGDRVAISRQIGSRWRLIGYGIIKE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132860 for 2959 contacts (-44.9/contact) +
2D Compatibility (PS) -38277 + (NN) -16494 + (LL) 3004
1D Compatibility (HY) -14800 + (ID) 5600
Total energy: -205027.0 ( -69.29 by residue)
QMean score : 0.519
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