Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIKTFLECALKEDLGH-----GDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLQMTG--IECVQNIKDKERFKPKDTLMEIRGDFSMLLKIERTLLNLLQHSSGIATLTSRFVEALNSPKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLKHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMSAGADIVMCDNMSVGETKEIAAYREAHYPFVLLEASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMKMA
3PAJ Chain:A ((21-295))-DITRSVIDTLKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEVFKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARYVQELKGTQCRLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGIRQAISTAKQLN-PGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINA---GRAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRFK


General information:
TITO was launched using:
RESULT:

Template: 3PAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154297 for 2203 contacts (-70.0/contact) +
2D Compatibility (PS) -28810 + (NN) -11633 + (LL) 348
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -216442.0 ( -98.25 by residue)
QMean score : 0.524

(partial model without unconserved sides chains):
PDB file : Tito_3PAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PAJ-query.scw
PDB file : Tito_Scwrl_3PAJ.pdb: