Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LEKERFRTELIGEKIGQLCKTYQFTYGYRKIAALMKQEE----Q--VGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQTQN
1K78 Chain:A ((94-142))
---------KVVEKIAEYKRQ-NPTMFAWEIRDRLLAERVCDNDTVPSVSSINRIIRTK-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1K78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27111 for 236 contacts (-114.9/contact) +
2D Compatibility (PS) -4589 + (NN) -481 + (LL) 6016
1D Compatibility (HY) -1200 + (ID) 400
Total energy: -27765.0 ( -117.65 by residue)
QMean score : 0.758
(partial model without unconserved sides chains):
PDB file :
Tito_1K78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1K78-query.scw
PDB file :
Tito_Scwrl_1K78.pdb
: