Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGIDGIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHSSTEHTWFKESRSSKTNPKRDYYIWREK-----PNNWESFFGGSAWEKDELTGEYYYHSFAKEQADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPVAS---GEMEHVYDRNQSGLEQALEDIASFCRKERDVFLVGEISSDKLPEIARYSS--KKMLDVTFNFNFGSVDQ---------LDAKSVFTTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGD----IVKTQLLAFLMLTAKGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTGT-DEKQALEIAIEKTRDKARGPMIFPDGK--PFTLGEPWIKMAT----LPEE----EARMMWDFYQALLAFRKENDF-KEMEYTFLKLD-GEVLSYQRG----EFIFLLHFGEEEITYPLQ---GNYQLVFGEAM-----MVENGIRMGAHTGIALRVEE |
1ZJA Chain:A ((4-557)) | APWWKSAVFYQVYPRSFKDTNGDGIGDFKGLTEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKRGMRLMVDVVINHSSDQHEWFKSSRASKDNPYRDYYFWRDGKDGHEPNNYPSFFGGSAWEKDPVTGQYYLHYFGRQQPDLNWDTPKLREELYAMLRFWLDKGVSGMRFDTVATYSKT---PGFPDLTPEQMKNFAEAYTQGPNLHRYLQEMHEKVFDHYDAVTAGEIFGAPLNQVPLFIDSRRKELDMAFTFDLIRYDRALDRWHTIPRTLADFRQTIDKVDAIAGEYGWNTFFLGNHDNPRAVSHFGDDRPQWREASAKALATVTLTQRGTPFIFQGDELGMTNYPFKTLQDFDDIEVKGFFQDYVETGKATAEELLTNVALTSRDNARTPFQWDDSANAGFTTGKPWLKVNPNYTEINAAREIGDPKSVYSFYRNLISIRHETPALSTGSYRDIDPSNADVYAYTRSQDGETYLVVVNFKAEPRSFTLPDGMHIAETLIESSSPAAPAAGAASLELQPWQSGIYKVK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ZJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197758 for 4406 contacts (-44.9/contact) +
2D Compatibility (PS) -54612 + (NN) -27873 + (LL) 516
1D Compatibility (HY) -36000 + (ID) 8750
Total energy: -324477.0 ( -73.64 by residue)
QMean score : 0.513
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