Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKADTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFPNWEDEVE |
| 3CNL Chain:A ((9-251)) | ----------EKAKRQIKDLLRLVNTVVEVRDARAPFATSAYGVD--FSRKETIILLNKVDIADEKTTKKWVEFFKKQGK--RVITTHKGEPRKVLLKKLS---------------FDRLARVLIVGVPNTGKSTIINKLKGKRA----------KGIQWFSLENGVKILDTPGILYKNIFSEDLAAKLLLVGSLPVERIEDQRIFERAFEIF--------ARSIGI---ESSFSEFFEDFARKRGLLKKGGVPDIERALMLFFTEVAQGKAGRVSFERPEDI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CNL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -76954 for 1818 contacts (-42.3/contact) +
2D Compatibility (PS) -25171 + (NN) -8485 + (LL) 3320
1D Compatibility (HY) -14400 + (ID) 3850
Total energy: -125540.0 ( -69.05 by residue)
QMean score : 0.453
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