Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEALELRDMASMTNSYTMITSNDWSALGDADVIVMAVGPETL--LREDRMEELVETSRSVAEIVPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEALHINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDYKTTTSLDLPALKDAVRGGGWNILTGKGWTSFGIATAVAGIVDAILTDAKQVFPLAVFSEKTSTYIGQPALIGANGVIDILEPPLTETEKINFNESAEIIKNAFQLI
1HYH Chain:A ((1-305))-ARKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWAALADADVVISTLGNIKLQQ-----FAELKFTSSMVQSVGTNLKESGFHGVLVVISNPVDVITALFQHVTGFPAHKVIGTGTLLDTARMQRAVGEAFDLDPRSVSGYNLGEHGNSQFVAWSTVRVMGQPIVTL-----IDLAAIEEEARKGGFTVLNGKGYTSYGVATSAIRIAKAVMADAHAELVVSNRRDDMGMYLSYPAIIGRDGVLAETTLDLTTDEQEKLLQSRDYIQQRFDEI


General information:
TITO was launched using:
RESULT:

Template: 1HYH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -223068 for 2570 contacts (-86.8/contact) +
2D Compatibility (PS) -31169 + (NN) -8158 + (LL) 772
1D Compatibility (HY) -22800 + (ID) 6150
Total energy: -290573.0 ( -113.06 by residue)
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_1HYH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HYH-query.scw
PDB file : Tito_Scwrl_1HYH.pdb: