Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
1Z6B Chain:C ((11-152))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSD-----NLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFAL-----
General information:
TITO was launched using:
RESULT:
Template:
1Z6B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98248 for 955 contacts (-102.9/contact) +
2D Compatibility (PS) -14086 + (NN) 317 + (LL) 264
1D Compatibility (HY) -18000 + (ID) 3300
Total energy: -133053.0 ( -139.32 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_1Z6B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z6B-query.scw
PDB file :
Tito_Scwrl_1Z6B.pdb
: