Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
3Q8U Chain:A ((1-133))
MERTFLMIKPDAVQRNLIGEVISRIERKGLKLVGGKLMQVPMELAETHYGEHQGKPFYNDLISFITSAPVFAMVVEGEDAVNVSRHIIGSTNPSEASPGSIRGDLGLT-----VGRNIIHGSDSLESAEREINLWFNE
General information:
TITO was launched using:
RESULT:
Template:
3Q8U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83755 for 1029 contacts (-81.4/contact) +
2D Compatibility (PS) -13956 + (NN) -3371 + (LL) -268
1D Compatibility (HY) -11600 + (ID) 3200
Total energy: -116150.0 ( -112.88 by residue)
QMean score : 0.549
(partial model without unconserved sides chains):
PDB file :
Tito_3Q8U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q8U-query.scw
PDB file :
Tito_Scwrl_3Q8U.pdb
: