Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHSSWHDLIKRELPNHYYNKINTFMDAVYES-GIVYPPRDKVFNAIQITPLENVKVVIIGQDPYHGPQQAQGLSFSVPDNLPAPPSLQNILKELAEDI-GS--RSHHDLTSWAQQGVLLLNACLTVPEHQANGHAGLIWEPFTDAVIKVVNQKETPVVFILWGGYARKKKSLIDNPIHHIIESPHPSPLSAYRGFFGSRPFSRTNHFLEEEGINEIDWLN
3UF7 Chain:A ((3-222))
-NELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPIDWMP
General information:
TITO was launched using:
RESULT:
Template:
3UF7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106288 for 1757 contacts (-60.5/contact) +
2D Compatibility (PS) -23228 + (NN) -13601 + (LL) 208
1D Compatibility (HY) -20800 + (ID) 5400
Total energy: -169109.0 ( -96.25 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_3UF7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF7-query.scw
PDB file :
Tito_Scwrl_3UF7.pdb
: