Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKHYQTIIIGAGAAGIGFGSAMQRLGLTNFLIIEKGHIGESFL--RWPRTTQFITPSFTTNGFGFPDLNAVIPDTSPAFSFEKEHLSGVEYARYLQLVAAHYNLPI----QNETSVLSIDKRDSLFVIKTSKG-DFSADYLIMATGEFQNPNTIDIKGAD-LGMHYGQVDNFHIK----SDNPFIIIGGNESACDALTHLVYLGNQVELYTD------TFGRKESNPDPSISLSPLTKERLKHI--------------------QDHKKEYYSISEGKKAIEIK------------------QIGKQYQVTFDDGSTAESF---------HKPILSTGFLNTCHLIDGIALFEYDKNQLPIVTED----DESTIVNNCFLI--------------------GPSLRQ-------------------------------RDTIFCYIYKFRQRFVPVINHIAQREGIILD---EDTLEFFKENQMYLDNLACCDVNCDC---------------------------------------- |
| 1W4X Chain:A ((10-542)) | RRQPPEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPG----ARCDIESIEYCYSFSEEVLQE----WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSVPQLPNFPGLKDFAGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPFGTKRLILEIDYYEMFN-RDNVHLVDTLSAPIETITPRGVRTSEREYELDSLVLATGFDALTGALFKIDIRGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKNGLTRSEAVLEKEDEWVEHVNEIADETLYPMTASWYTGANVPGKPRVFMLYVGGFHRYRQICDEVAAKGYEGFVLT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1W4X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188452 for 2578 contacts (-73.1/contact) +
2D Compatibility (PS) -38838 + (NN) -9837 + (LL) 560
1D Compatibility (HY) -12000 + (ID) 2900
Total energy: -251467.0 ( -97.54 by residue)
QMean score : 0.451
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