Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTIQWFPGHMAKARREVTEKLKLIDIVYELVDARIPMSSRNPMIEDILKNKPRIMLLNKADKADAAV----TQQWKEHFEN-QGI---RSLSINSVNGQGLNQIVPASKEILQEKFDRMRAKGVKPRAIRALIIGIPNVGKSTLINRLAKK------NIAKTGDRPGITTSQQWVKVGKELELLDTPGILWPKFEDELVGLRLAVTGAIKDSIINLQDVAVFGLRFLEEHYPERLKERYGLDEIPEDIAELFDAIGEKRGCLMSGGLINYDKTTEVIIRDIRTEKFGRLSFEQPTM
3H2Y Chain:A ((69-225))----------------------SDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYR--------------GGKDVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFP----DLIDIPLDEESSLYDTPGIINHH-------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 643 -69409 -107.94 -499.34
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -107.94
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_3H2Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H2Y-query.scw
PDB file : Tito_Scwrl_3H2Y.pdb: