Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISFIFAMDANRLIGKDNDLPWHLPNDLAYFKKITSGHSIIMGRKTFESIG-RPLPNRKNIVVTSAPDSEFQGCTVVSSLKDVLDICSGPEECFVIGGAQ-LYTDLFPYADRLYMTKIHHEFEGDRHFPEFDESNWKLVSSEQGT-KDEKNPYDYEFLMYEKKNSSKAGGF
4M7U Chain:A ((9-170))MLAAIWAQDEQGVIGKEGKLPWHLPNDLKFFKEKTIHNTLVLGRATFEGMGCRPLPNRTTIVLTSNPDYQAEGVLVMHSVEEILAYADKYEGVTVIGGGSVVFKELIPACDVLYRTMIHETFEGDTFFPEIDWSVWEKVA-TVPGVVDEKNLYAHDYETYHRN--------


General information:
TITO was launched using:
RESULT:

Template: 4M7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 762 -31508 -41.35 -198.16
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -41.35
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.631

(partial model without unconserved sides chains):
PDB file : Tito_4M7U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M7U-query.scw
PDB file : Tito_Scwrl_4M7U.pdb: