Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENVFDYEDIQLIPAKCIVNSRSECDTSVRLG-GHTFKLPVVPANMQTIIDEKLAISLAENGYFYVMHRFE-PE---TRIDFIKD------------MNARG---LFSSISVGVKDEEYEFVRQLAEENLTPEYVTIDIAHGHSNAVIEMIQHLKKHLPDSFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA---SKPIIADGGIRTHGDIAKSIRFGATMVMIGSLFAGHEESPGQTIEKDGKLYKEYFGSASEFQK--GEKKNVEGKKMHVAHKGSIKDTLIEMEQDLQSSISYAGGTKLNAIRN-VDYVIVKNSIFNGDKY
4R7J Chain:A ((7-367))VKRALTFEDVLLRPGYSEVL-PKEVKIHTKLTKNITLNMPLISAAMDTVTEHRAAIMMARLGGLGVIHKNMDIASQVREVKRVKKSEKKRKEYPDANKDNFGRLRVGAAI--GV--GQMDRVDALVEAG--VDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDLIAGNIATAAAAKALCEAGVDAVKVGIGPGSICTTRIVSGVGVP--QISAIDECVEEANKFGVPVIADGGIKYSGDIAKALAVGASSVMIGSLLAGTDESPGELFTYQGRQYKSYRGMGSLGAMQK---LVPEGIEGRVPYVGSIRSVVHQLLGGLRSSMGYVGAKDIEDFQKRAEFVEITTAGLKESH-


General information:
TITO was launched using:
RESULT:

Template: 4R7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1928 10912 5.66 34.86
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : 5.66
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_4R7J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R7J-query.scw
PDB file : Tito_Scwrl_4R7J.pdb: