Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLRTEKEKMAAGELYNSEDQQLLLERKHARQLIRQYNETP-EDDAVRTKLLKELL-GSVGDQVTILPTFRCDYGYHIHIGDHTFVNFDCVILDVCEVRIGCHCLIAPGVHIYTAGHPLDPIERKSGKEFGKPVTIGDQVWIGGRAVINPGVTIGDNAVIASGSVVTKDVPANTVVGGNPARILKQL
3HJJ Chain:A ((3-188))AMKTEKDKMLAGEMYIADDEELVADRVEAKRLTRLYNEAVETGDERRFTLLNQLLGSSADGKAQINPDFRCDYGYNIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGDNAVIASGAVVTKDVPNNVVVGGNPAKVIKTI


General information:
TITO was launched using:
RESULT:

Template: 3HJJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 965 -36649 -37.98 -199.18
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.90

3D Compatibility (PKB) : -37.98
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_3HJJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJJ-query.scw
PDB file : Tito_Scwrl_3HJJ.pdb: