Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVTPNAGCVDVVIVGAGISGLGAAYRIIERNPQLTYTILERRARIGGTWDL-FRYPGVRSDSSIFTLSFPYEPWTREEGIADGAHIREYLTDMAHKYGIDRHIEFNSYVRAADWDSSTDTWTVTFEQNGVHKHYRSRFVFFGSGYYNYDEGYTPDFGGIEKFGGAVVHPQHWPEDLDYTGKKIVVIGSGATAVTLIPSLTDRAEKVTMLQRSPTYLISASKYSTFAAVVRKALPPKTSHLIVRMYNALLEAVFWFLSRKTPVFVKWLLRRTAIKNLPEGYDIETHFTPRYNPWDQRLCLIPDADLYNAITSGRAEVVTDHIDHFDATGIALKSGGHLDADIIVTATGL-----QLQALGGAAISLDGVEIDPRDRFVYKAHMLEDVPNLFWCVGYTNASWTLRADMTARATAKLLAHMAAHGHTRAAPHLGDEPMDEKPSWDIQAGYVKRAPYALPKSGTKRPWNVRQNYLADAIDYRFDRIEEAMVFGAA |
| 4USR Chain:A ((1-357)) | --GPAMPPILDVIVIGGGQAALTTAYFLR--RTSLSYLLLDEQPGPGGAWLHAWDSLRLFSPAAWSSIAGWPMPSPTEPGNPTRNDVIDYLRRYEDRY----QFPIQRPVRVDTVTRLDDLWRVQAGD----QQWLARAVISATG--TWSKPFIPPYEGRELFQGAQIHSAHYRTPAPFAGKRVMVVGGGNSGAQVLAELSSVSETLWITQEPPAFL-----------------PDEVDG--------------------------RVLFERATARWKAQQEGRSIDEPAGGFGD----IVMVPPVREARERGVL-VAERPFARFTETGVEWADGRRENLDAVIWCSGFRPALDHLRELG---------VVEADGKVQVEDTRVVKQPN-LWLVGYGDWTGM------ASATLIGVTRTARSTADQVVQALTATP--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4USR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208140 for 2892 contacts (-72.0/contact) +
2D Compatibility (PS) -37620 + (NN) -19129 + (LL) 10908
1D Compatibility (HY) -15600 + (ID) 3750
Total energy: -273331.0 ( -94.51 by residue)
QMean score : 0.488
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